Research workbench
AlphaFold monomer V2.0 prediction for SPERMIDINE/PUTRESCINE import ATP-binding protein pota (P69876)
Analyse AlphaFold monomer V2.0 prediction for SPERMIDINE/PUTRESCINE import ATP-binding… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P69876
- Type
- protein
- Length
- 378 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x025f3b1a898b05AD2731bE6Ab72687b5920c4A3F
- Molecule
- SPERMIDINE/PUTRESCINE import ATP-binding protein pota
- UniProt
- P69876
- Pockets
- 2 · best druggability 0.52
Structure
1 distinct chain · 26% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | SPERMIDINE/PUTRESCINE import ATP-binding protein pota | protein | 378 | 26% helix, 35% strand | P69876 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 230 | 0.52 | 0.76 | 25 | empty |
| 2 | 89 | 0.36 | 0.75 | 21 | empty |
Compared structures
- 8ZX1 · Cryo-EM structure of E.coli spermidine transporter PotABC in nanodisc · an experimental structure of the same protein · chain A against A, TM-score 0.91
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P69876
- Elsewhere: UniProt P69876 · AlphaFold DB P69876
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.