Research workbench
AlphaFold monomer V2.0 prediction for beta-porphyranase D (D7GXG2)
Analyse AlphaFold monomer V2.0 prediction for beta-porphyranase D (D7GXG2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- D7GXG2
- Type
- protein
- Length
- 427 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9188600a0FCa2914254C94299b1bd9721Bc4D500
- Molecule
- Beta-porphyranase D
- UniProt
- D7GXG2
- Pockets
- 4 · best druggability 0.59
Structure
1 distinct chain · 5% helix, 48% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Beta-porphyranase D | protein | 427 | 5% helix, 48% strand | D7GXG2 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 50 | 0.59 | 0.92 | 18 | empty |
| 2 | 223 | 0.49 | 0.75 | 29 | empty |
| 3 | 150 | 0.43 | 0.75 | 28 | empty |
| 4 | 133 | 0.41 | 0.75 | 27 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D7GXG2
- Elsewhere: UniProt D7GXG2 · AlphaFold DB D7GXG2
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