Research workbench
AlphaFold monomer V2.0 prediction for beta-porphyranase a (D7GXG0)
Analyse AlphaFold monomer V2.0 prediction for beta-porphyranase a (D7GXG0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- D7GXG0
- Type
- protein
- Length
- 510 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xe0E10F6Dc29B8612b7e5eB6df77084BB05995901
- Molecule
- Beta-porphyranase a
- UniProt
- D7GXG0
- Pockets
- 3 · best druggability 0.51
Structure
1 distinct chain · 4% helix, 41% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Beta-porphyranase a | protein | 510 | 4% helix, 41% strand | D7GXG0 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 255 | 0.51 | 0.75 | 33 | empty |
| 2 | 199 | 0.45 | 0.74 | 31 | empty |
| 3 | 55 | 0.37 | 0.79 | 16 | empty |
Compared structures
- 4ATE · High resolution crystal structure of beta-porphyranase a from zobellia galactanivorans · an experimental structure of the same protein · chain A against A, TM-score 0.50
- 4ATE · High resolution crystal structure of beta-porphyranase A from Zobellia galactanivorans · an experimental structure of the same protein · chain A against A, TM-score 0.50
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D7GXG0
- Elsewhere: UniProt D7GXG0 · AlphaFold DB D7GXG0
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