Research workbench
AlphaFold monomer V2.0 prediction for retrovirus-related pol polyprotein from transposon tnt 1-94 (P10978)
Analyse AlphaFold monomer V2.0 prediction for retrovirus-related pol polyprotein from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P10978
- Type
- protein
- Length
- 1,328 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xc0F878C3f3E2a1874e2A6daC80d429e553DdB0D5
- Molecule
- Retrovirus-related pol polyprotein from transposon tnt 1-94
- UniProt
- P10978
- Pockets
- 12 · best druggability 0.74
Structure
1 distinct chain · 33% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Retrovirus-related pol polyprotein from transposon tnt 1-94 | protein | 1328 | 33% helix, 19% strand | P10978 |
Pockets
12 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 985 | 0.74 | 0.77 | 81 | empty |
| 2 | 501 | 0.68 | 0.78 | 35 | empty |
| 3 | 314 | 0.58 | 0.77 | 37 | empty |
| 4 | 381 | 0.58 | 0.75 | 41 | empty |
| 5 | 251 | 0.50 | 0.75 | 30 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P10978
- Elsewhere: UniProt P10978 · AlphaFold DB P10978
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