Research workbench
AlphaFold monomer V2.0 prediction for DNA polymerase kappa (P34409)
Analyse AlphaFold monomer V2.0 prediction for DNA polymerase kappa (P34409) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P34409
- Type
- protein
- Length
- 596 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x24b6633C8ABa741dB6572E7cDdf0Af3176c8A10F
- Molecule
- DNA polymerase kappa
- UniProt
- P34409
- Pockets
- 5 · best druggability 0.53
Structure
1 distinct chain · 39% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA polymerase kappa | protein | 596 | 39% helix, 19% strand | P34409 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 250 | 0.53 | 0.77 | 33 | empty |
| 2 | 192 | 0.49 | 0.76 | 18 | empty |
| 3 | 154 | 0.43 | 0.75 | 26 | empty |
| 4 | 84 | 0.33 | 0.74 | 19 | empty |
| 5 | 73 | 0.30 | 0.73 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P34409
- Elsewhere: UniProt P34409 · AlphaFold DB P34409
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