Research workbench
AlphaFold monomer V2.0 prediction for DNA polymerase I B, CHLOROPLASTIC/MITOCHONDRIAL (Q84ND9)
Analyse AlphaFold monomer V2.0 prediction for DNA polymerase I B… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q84ND9
- Type
- protein
- Length
- 1,034 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x61B20aA3665705659d01e857CF16dedE7882E4F5
- Molecule
- DNA polymerase I B, CHLOROPLASTIC/MITOCHONDRIAL
- UniProt
- Q84ND9
- Pockets
- 13 · best druggability 0.81
Structure
1 distinct chain · 39% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA polymerase I B, CHLOROPLASTIC/MITOCHONDRIAL | protein | 1034 | 39% helix, 13% strand | Q84ND9 |
Pockets
13 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 955 | 0.81 | 0.83 | 92 | empty |
| 2 | 257 | 0.61 | 0.80 | 34 | empty |
| 3 | 340 | 0.60 | 0.78 | 41 | empty |
| 4 | 240 | 0.56 | 0.78 | 30 | empty |
| 5 | 173 | 0.48 | 0.77 | 26 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q84ND9
- Elsewhere: UniProt Q84ND9 · AlphaFold DB Q84ND9
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