Research workbench
AlphaFold monomer V2.0 prediction for endogenous retrovirus group K member 7 pol protein (P63135)
Analyse AlphaFold monomer V2.0 prediction for endogenous retrovirus group K member 7… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P63135
- Type
- protein
- Length
- 1,459 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9F2924E1D2C3ba0367A5dD34e521d327788cCc9F
- Molecule
- Endogenous retrovirus group K member 7 pol protein
- UniProt
- P63135
- Pockets
- 20 · best druggability 0.79
Structure
1 distinct chain · 36% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Endogenous retrovirus group K member 7 pol protein | protein | 1459 | 36% helix, 22% strand | P63135 |
Pockets
20 pockets found on a 1 Å grid, 9 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1190 | 0.79 | 0.81 | 82 | empty |
| 2 | 801 | 0.78 | 0.81 | 80 | empty |
| 3 | 599 | 0.75 | 0.82 | 59 | empty |
| 4 | 293 | 0.62 | 0.80 | 40 | empty |
| 5 | 453 | 0.61 | 0.75 | 48 | empty |
Modifications
Observed in the structure: 7 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P63135
- Elsewhere: UniProt P63135 · AlphaFold DB P63135
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