Research workbench
AlphaFold monomer V2.0 prediction for endogenous retrovirus group K member 6 pol protein (Q9BXR3)
Analyse AlphaFold monomer V2.0 prediction for endogenous retrovirus group K member 6… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9BXR3
- Type
- protein
- Length
- 956 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xc0F878C3f3E2a1874e2A6daC80d429e553DdB0D5
- Molecule
- Endogenous retrovirus group K member 6 pol protein
- UniProt
- Q9BXR3
- Pockets
- 10 · best druggability 0.74
Structure
1 distinct chain · 35% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Endogenous retrovirus group K member 6 pol protein | protein | 956 | 35% helix, 19% strand | Q9BXR3 |
Pockets
10 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 733 | 0.74 | 0.79 | 61 | empty |
| 2 | 1162 | 0.70 | 0.75 | 80 | empty |
| 3 | 549 | 0.67 | 0.77 | 63 | empty |
| 4 | 268 | 0.58 | 0.78 | 24 | empty |
| 5 | 217 | 0.55 | 0.78 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9BXR3
- Elsewhere: UniProt Q9BXR3 · AlphaFold DB Q9BXR3
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