Research workbench
AlphaFold monomer V2.0 prediction for pogo transposable element with znf domain (Q8BZH4)
Analyse AlphaFold monomer V2.0 prediction for pogo transposable element with znf domain… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8BZH4
- Type
- protein
- Length
- 1,409 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb79Be7b7d1b9E26f9E163F0C8eb7B481A7ce5C72
- Molecule
- Pogo transposable element with znf domain
- UniProt
- Q8BZH4
- Pockets
- 13 · best druggability 0.80
Structure
1 distinct chain · 25% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pogo transposable element with znf domain | protein | 1409 | 25% helix, 7% strand | Q8BZH4 |
Pockets
13 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1100 | 0.80 | 0.82 | 80 | empty |
| 2 | 828 | 0.71 | 0.77 | 65 | empty |
| 3 | 573 | 0.66 | 0.76 | 53 | empty |
| 4 | 428 | 0.63 | 0.77 | 62 | empty |
| 5 | 408 | 0.62 | 0.77 | 41 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8BZH4
- Elsewhere: UniProt Q8BZH4 · AlphaFold DB Q8BZH4
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