Research workbench
AlphaFold monomer V2.0 prediction for nicotinate phosphoribosyltransferase (Q5PGD8)
Analyse AlphaFold monomer V2.0 prediction for nicotinate phosphoribosyltransferase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5PGD8
- Type
- protein
- Length
- 400 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1620032580Cf2476f2BD828E85045251C289D3d8
- Molecule
- Nicotinate phosphoribosyltransferase
- UniProt
- Q5PGD8
- Pockets
- 3 · best druggability 0.78
Structure
1 distinct chain · 47% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nicotinate phosphoribosyltransferase | protein | 400 | 47% helix, 15% strand | Q5PGD8 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 456 | 0.78 | 0.86 | 66 | empty |
| 2 | 50 | 0.32 | 0.77 | 14 | empty |
| 3 | 56 | 0.24 | 0.72 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5PGD8
- Elsewhere: UniProt Q5PGD8 · AlphaFold DB Q5PGD8
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