Research workbench
AlphaFold monomer V2.0 prediction for nicotinate phosphoribosyltransferase (Q2KDT0)
Analyse AlphaFold monomer V2.0 prediction for nicotinate phosphoribosyltransferase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q2KDT0
- Type
- protein
- Length
- 434 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x70189663D9D82ce5dB28B4Fdc41ba0b8D3788BD3
- Molecule
- Nicotinate phosphoribosyltransferase
- UniProt
- Q2KDT0
- Pockets
- 5 · best druggability 0.85
Structure
1 distinct chain · 52% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nicotinate phosphoribosyltransferase | protein | 434 | 52% helix, 14% strand | Q2KDT0 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 341 | 0.85 | 0.95 | 43 | empty |
| 2 | 202 | 0.65 | 0.84 | 31 | empty |
| 3 | 143 | 0.51 | 0.79 | 20 | empty |
| 4 | 64 | 0.41 | 0.80 | 15 | empty |
| 5 | 105 | 0.39 | 0.75 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2KDT0
- Elsewhere: UniProt Q2KDT0 · AlphaFold DB Q2KDT0
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