Research workbench
AlphaFold monomer V2.0 prediction for nicotinate phosphoribosyltransferase (Q87VL5)
Analyse AlphaFold monomer V2.0 prediction for nicotinate phosphoribosyltransferase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q87VL5
- Type
- protein
- Length
- 407 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xD86B4032112B5dba7535Bb105250262431095730
- Molecule
- Nicotinate phosphoribosyltransferase
- UniProt
- Q87VL5
- Pockets
- 3 · best druggability 0.75
Structure
1 distinct chain · 48% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nicotinate phosphoribosyltransferase | protein | 407 | 48% helix, 16% strand | Q87VL5 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 336 | 0.75 | 0.86 | 40 | empty |
| 2 | 234 | 0.58 | 0.79 | 25 | empty |
| 3 | 108 | 0.49 | 0.81 | 27 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q87VL5
- Elsewhere: UniProt Q87VL5 · AlphaFold DB Q87VL5
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