Research workbench
AlphaFold monomer V2.0 prediction for probable methyltransferase PMT27 (Q9SD39)
Analyse AlphaFold monomer V2.0 prediction for probable methyltransferase PMT27 (Q9SD39) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9SD39
- Type
- protein
- Length
- 895 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x2F61dB7B2C9a82D9F38c269549C95103f50F9AEa
- Molecule
- Probable methyltransferase PMT27
- UniProt
- Q9SD39
- Pockets
- 8 · best druggability 0.81
Structure
1 distinct chain · 27% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable methyltransferase PMT27 | protein | 895 | 27% helix, 13% strand | Q9SD39 |
Pockets
8 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 896 | 0.81 | 0.83 | 83 | empty |
| 2 | 103 | 0.77 | 0.97 | 20 | empty |
| 3 | 498 | 0.62 | 0.75 | 51 | empty |
| 4 | 132 | 0.57 | 0.83 | 21 | empty |
| 5 | 245 | 0.56 | 0.78 | 28 | empty |
Modifications
Observed in the structure: 6 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9SD39
- Elsewhere: UniProt Q9SD39 · AlphaFold DB Q9SD39
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