Research workbench
AlphaFold monomer V2.0 prediction for probable methyltransferase PMT1 (Q8H118)
Analyse AlphaFold monomer V2.0 prediction for probable methyltransferase PMT1 (Q8H118) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8H118
- Type
- protein
- Length
- 611 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd91633319BDB0a92cbC4f08DeA734Bf74C030064
- Molecule
- Probable methyltransferase PMT1
- UniProt
- Q8H118
- Pockets
- 10 · best druggability 0.74
Structure
1 distinct chain · 35% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable methyltransferase PMT1 | protein | 611 | 35% helix, 18% strand | Q8H118 |
Pockets
10 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 96 | 0.74 | 0.96 | 25 | empty |
| 2 | 272 | 0.68 | 0.84 | 41 | empty |
| 3 | 161 | 0.66 | 0.86 | 24 | empty |
| 4 | 222 | 0.63 | 0.82 | 21 | empty |
| 5 | 153 | 0.62 | 0.84 | 23 | empty |
Modifications
Observed in the structure: 6 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8H118
- Elsewhere: UniProt Q8H118 · AlphaFold DB Q8H118
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