Research workbench
AlphaFold monomer V2.0 prediction for probable outer membrane protein pmpi (Q9PL41)
Analyse AlphaFold monomer V2.0 prediction for probable outer membrane protein pmpi… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9PL41
- Type
- protein
- Length
- 867 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x878270033Ee620a8cF73fb621f575785954ef24B
- Molecule
- Probable outer membrane protein pmpi
- UniProt
- Q9PL41
- Pockets
- 6 · best druggability 0.68
Structure
1 distinct chain · 7% helix, 56% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable outer membrane protein pmpi | protein | 867 | 7% helix, 56% strand | Q9PL41 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 243 | 0.68 | 0.85 | 48 | empty |
| 2 | 97 | 0.39 | 0.77 | 23 | empty |
| 3 | 98 | 0.39 | 0.76 | 20 | empty |
| 4 | 119 | 0.38 | 0.74 | 18 | empty |
| 5 | 72 | 0.38 | 0.78 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9PL41
- Elsewhere: UniProt Q9PL41 · AlphaFold DB Q9PL41
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