Research workbench
AlphaFold monomer V2.0 prediction for probable outer membrane protein pmpg (O84879)
Analyse AlphaFold monomer V2.0 prediction for probable outer membrane protein pmpg… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O84879
- Type
- protein
- Length
- 1,013 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xCD02372865c553eFF897aF289Ecf524a0ff9D69e
- Molecule
- Probable outer membrane protein pmpg
- UniProt
- O84879
- Pockets
- 9 · best druggability 0.71
Structure
1 distinct chain · 6% helix, 50% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable outer membrane protein pmpg | protein | 1013 | 6% helix, 50% strand | O84879 |
Pockets
9 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 208 | 0.71 | 0.88 | 50 | empty |
| 2 | 52 | 0.68 | 0.97 | 20 | empty |
| 3 | 140 | 0.57 | 0.82 | 20 | empty |
| 4 | 114 | 0.41 | 0.76 | 22 | empty |
| 5 | 56 | 0.38 | 0.80 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O84879
- Elsewhere: UniProt O84879 · AlphaFold DB O84879
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