Research workbench
AlphaFold monomer V2.0 prediction for probable outer membrane protein pmpa (Q9PJY3)
Analyse AlphaFold monomer V2.0 prediction for probable outer membrane protein pmpa… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9PJY3
- Type
- protein
- Length
- 976 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xaBea2334E0055Ee4315718a06ED8EA4943723724
- Molecule
- Probable outer membrane protein pmpa
- UniProt
- Q9PJY3
- Pockets
- 6 · best druggability 0.84
Structure
1 distinct chain · 7% helix, 56% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable outer membrane protein pmpa | protein | 976 | 7% helix, 56% strand | Q9PJY3 |
Pockets
6 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 274 | 0.84 | 0.96 | 51 | empty |
| 2 | 133 | 0.79 | 0.97 | 30 | empty |
| 3 | 281 | 0.54 | 0.76 | 41 | empty |
| 4 | 110 | 0.51 | 0.81 | 17 | empty |
| 5 | 71 | 0.37 | 0.77 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9PJY3
- Elsewhere: UniProt Q9PJY3 · AlphaFold DB Q9PJY3
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