Research workbench
AlphaFold monomer V2.0 prediction for probable outer membrane protein PMP8 (Q9Z393)
Analyse AlphaFold monomer V2.0 prediction for probable outer membrane protein PMP8… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9Z393
- Type
- protein
- Length
- 930 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0D671490EE06E75975e90D7F99F73B20BE618744
- Molecule
- Probable outer membrane protein PMP8
- UniProt
- Q9Z393
- Pockets
- 5 · best druggability 0.81
Structure
1 distinct chain · 6% helix, 52% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable outer membrane protein PMP8 | protein | 930 | 6% helix, 52% strand | Q9Z393 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 174 | 0.81 | 0.96 | 31 | empty |
| 2 | 134 | 0.46 | 0.77 | 26 | empty |
| 3 | 62 | 0.43 | 0.82 | 17 | empty |
| 4 | 61 | 0.26 | 0.72 | 14 | empty |
| 5 | 56 | 0.25 | 0.73 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Z393
- Elsewhere: UniProt Q9Z393 · AlphaFold DB Q9Z393
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