Research workbench
AlphaFold monomer V2.0 prediction for probable outer membrane protein PMP16 (Q9Z882)
Analyse AlphaFold monomer V2.0 prediction for probable outer membrane protein PMP16… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9Z882
- Type
- protein
- Length
- 952 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xe31a910f6C16a75742b91e7617931F9bE87c1D6c
- Molecule
- Probable outer membrane protein PMP16
- UniProt
- Q9Z882
- Pockets
- 11 · best druggability 0.81
Structure
1 distinct chain · 8% helix, 51% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable outer membrane protein PMP16 | protein | 952 | 8% helix, 51% strand | Q9Z882 |
Pockets
11 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 517 | 0.81 | 0.88 | 69 | empty |
| 2 | 78 | 0.75 | 0.98 | 19 | empty |
| 3 | 249 | 0.59 | 0.79 | 40 | empty |
| 4 | 245 | 0.51 | 0.75 | 26 | empty |
| 5 | 205 | 0.50 | 0.76 | 30 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Z882
- Elsewhere: UniProt Q9Z882 · AlphaFold DB Q9Z882
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