Research workbench
AlphaFold monomer V2.0 prediction for PECTINESTERASE/PECTINESTERASE inhibitor 3 (O49006)
Analyse AlphaFold monomer V2.0 prediction for PECTINESTERASE/PECTINESTERASE inhibitor 3… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O49006
- Type
- protein
- Length
- 592 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xe105c2490C4fFdD8604575963307f3aF15bE6d9B
- Molecule
- PECTINESTERASE/PECTINESTERASE inhibitor 3
- UniProt
- O49006
- Pockets
- 4 · best druggability 0.68
Structure
1 distinct chain · 39% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | PECTINESTERASE/PECTINESTERASE inhibitor 3 | protein | 592 | 39% helix, 19% strand | O49006 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 576 | 0.68 | 0.78 | 65 | empty |
| 2 | 224 | 0.54 | 0.78 | 31 | empty |
| 3 | 77 | 0.36 | 0.76 | 19 | empty |
| 4 | 55 | 0.28 | 0.74 | 12 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O49006
- Elsewhere: UniProt O49006 · AlphaFold DB O49006
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