Research workbench
AlphaFold monomer V2.0 prediction for pectate lyase (Q56806)
Analyse AlphaFold monomer V2.0 prediction for pectate lyase (Q56806) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q56806
- Type
- protein
- Length
- 377 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x44E9181FBf88898482e9B5f9f7eBcE7D1B2b0722
- Molecule
- Pectate lyase
- UniProt
- Q56806
- Pockets
- 1 · best druggability 0.41
Structure
1 distinct chain · 12% helix, 34% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pectate lyase | protein | 377 | 12% helix, 34% strand | Q56806 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 152 | 0.41 | 0.74 | 30 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q56806
- Elsewhere: UniProt Q56806 · AlphaFold DB Q56806
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