Research workbench
AlphaFold monomer V2.0 prediction for pectate disaccharide-lyase (P22751)
Analyse AlphaFold monomer V2.0 prediction for pectate disaccharide-lyase (P22751) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P22751
- Type
- protein
- Length
- 749 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xe105c2490C4fFdD8604575963307f3aF15bE6d9B
- Molecule
- Pectate disaccharide-lyase
- UniProt
- P22751
- Pockets
- 6 · best druggability 0.68
Structure
1 distinct chain · 5% helix, 38% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pectate disaccharide-lyase | protein | 749 | 5% helix, 38% strand | P22751 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 682 | 0.68 | 0.77 | 46 | empty |
| 2 | 111 | 0.53 | 0.83 | 26 | empty |
| 3 | 253 | 0.52 | 0.75 | 27 | empty |
| 4 | 161 | 0.40 | 0.73 | 22 | empty |
| 5 | 61 | 0.32 | 0.76 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P22751
- Elsewhere: UniProt P22751 · AlphaFold DB P22751
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