Research workbench
AlphaFold monomer V2.0 prediction for probable pectate lyase F (A1D5E3)
Analyse AlphaFold monomer V2.0 prediction for probable pectate lyase F (A1D5E3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A1D5E3
- Type
- protein
- Length
- 234 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xeEdBcC4C2c68d9AE2F22aFc54636db55e3863ebF
- Molecule
- Probable pectate lyase F
- UniProt
- A1D5E3
- Pockets
- 1 · best druggability 0.41
Structure
1 distinct chain · 1% helix, 48% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable pectate lyase F | protein | 234 | 1% helix, 48% strand | A1D5E3 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 110 | 0.41 | 0.76 | 23 | empty |
Modifications
Observed in the structure: 7 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A1D5E3
- Elsewhere: UniProt A1D5E3 · AlphaFold DB A1D5E3
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