Research workbench
AlphaFold monomer V2.0 prediction for probable pectate lyase E (B0Y9M8)
Analyse AlphaFold monomer V2.0 prediction for probable pectate lyase E (B0Y9M8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B0Y9M8
- Type
- protein
- Length
- 254 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4Ef77Afb5a3D9F41c95Be3227D1CC986CCb61835
- Molecule
- Probable pectate lyase E
- UniProt
- B0Y9M8
- Pockets
- 2 · best druggability 0.38
Structure
1 distinct chain · 2% helix, 49% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable pectate lyase E | protein | 254 | 2% helix, 49% strand | B0Y9M8 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 126 | 0.38 | 0.74 | 23 | empty |
| 2 | 64 | 0.29 | 0.74 | 15 | empty |
Modifications
Observed in the structure: 5 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B0Y9M8
- Elsewhere: UniProt B0Y9M8 · AlphaFold DB B0Y9M8
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.