Research workbench
AlphaFold monomer V2.0 prediction for probable pectate lyase D (Q4WGV9)
Analyse AlphaFold monomer V2.0 prediction for probable pectate lyase D (Q4WGV9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q4WGV9
- Type
- protein
- Length
- 242 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6F6a5c9334F619f67E7EBBea07eF86f05b9c4052
- Molecule
- Probable pectate lyase D
- UniProt
- Q4WGV9
- Pockets
- 1 · best druggability 0.36
Structure
1 distinct chain · 2% helix, 50% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable pectate lyase D | protein | 242 | 2% helix, 50% strand | Q4WGV9 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 100 | 0.36 | 0.75 | 23 | empty |
Modifications
Observed in the structure: 5 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4WGV9
- Elsewhere: UniProt Q4WGV9 · AlphaFold DB Q4WGV9
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