Research workbench
AlphaFold monomer V2.0 prediction for pectate lyase 1 (P18632)
Analyse AlphaFold monomer V2.0 prediction for pectate lyase 1 (P18632) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P18632
- Type
- protein
- Length
- 374 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1647F35A28688000958944B2f9d235C7c91d22B9
- Molecule
- Pectate lyase 1
- UniProt
- P18632
- Pockets
- 2 · best druggability 0.34
Structure
1 distinct chain · 9% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pectate lyase 1 | protein | 374 | 9% helix, 35% strand | P18632 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 53 | 0.34 | 0.78 | 11 | empty |
| 2 | 60 | 0.28 | 0.73 | 16 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P18632
- Elsewhere: UniProt P18632 · AlphaFold DB P18632
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