Research workbench
AlphaFold monomer V2.0 prediction for omega-hydroxyceramide transacylase (Q3V1D5)
Analyse AlphaFold monomer V2.0 prediction for omega-hydroxyceramide transacylase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q3V1D5
- Type
- protein
- Length
- 599 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9188600a0FCa2914254C94299b1bd9721Bc4D500
- Molecule
- Omega-hydroxyceramide transacylase
- UniProt
- Q3V1D5
- Pockets
- 6 · best druggability 0.74
Structure
1 distinct chain · 23% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Omega-hydroxyceramide transacylase | protein | 599 | 23% helix, 7% strand | Q3V1D5 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 241 | 0.74 | 0.87 | 30 | empty |
| 2 | 244 | 0.52 | 0.75 | 32 | empty |
| 3 | 143 | 0.43 | 0.76 | 26 | empty |
| 4 | 91 | 0.41 | 0.78 | 15 | empty |
| 5 | 121 | 0.41 | 0.76 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3V1D5
- Elsewhere: UniProt Q3V1D5 · AlphaFold DB Q3V1D5
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