Research workbench
AlphaFold monomer V2.0 prediction for lysophospholipase 3 (Q08108)
Analyse AlphaFold monomer V2.0 prediction for lysophospholipase 3 (Q08108) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q08108
- Type
- protein
- Length
- 686 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd91633319BDB0a92cbC4f08DeA734Bf74C030064
- Molecule
- Lysophospholipase 3
- UniProt
- Q08108
- Pockets
- 11 · best druggability 0.53
Structure
1 distinct chain · 38% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lysophospholipase 3 | protein | 686 | 38% helix, 11% strand | Q08108 |
Pockets
11 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 242 | 0.53 | 0.76 | 21 | empty |
| 2 | 113 | 0.50 | 0.80 | 23 | empty |
| 3 | 99 | 0.46 | 0.80 | 19 | empty |
| 4 | 141 | 0.45 | 0.77 | 18 | empty |
| 5 | 76 | 0.43 | 0.81 | 20 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q08108
- Elsewhere: UniProt Q08108 · AlphaFold DB Q08108
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