Research workbench
AlphaFold monomer V2.0 prediction for polyketide biosynthesis malonyl-acp decarboxylase pksf (P40804)
Analyse AlphaFold monomer V2.0 prediction for polyketide biosynthesis malonyl-acp… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P40804
- Type
- protein
- Length
- 415 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbDA05C32aD6eE153C8C5A78dfa48d7Ba25694fea
- Molecule
- Polyketide biosynthesis malonyl-acp decarboxylase pksf
- UniProt
- P40804
- Pockets
- 3 · best druggability 0.67
Structure
1 distinct chain · 38% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Polyketide biosynthesis malonyl-acp decarboxylase pksf | protein | 415 | 38% helix, 21% strand | P40804 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 260 | 0.67 | 0.83 | 45 | empty |
| 2 | 108 | 0.36 | 0.73 | 24 | empty |
| 3 | 88 | 0.34 | 0.74 | 23 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P40804
- Elsewhere: UniProt P40804 · AlphaFold DB P40804
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