Research workbench
AlphaFold monomer V2.0 prediction for probable polyketide synthase 42 (Q54D44)
Analyse AlphaFold monomer V2.0 prediction for probable polyketide synthase 42 (Q54D44) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q54D44
- Type
- protein
- Length
- 2,655 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xA2fdd713aD44FEaB35f647A718BbBC275A319Dce
- Molecule
- Probable polyketide synthase 42
- UniProt
- Q54D44
- Pockets
- 20 · best druggability 0.80
Structure
1 distinct chain · 40% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable polyketide synthase 42 | protein | 2655 | 40% helix, 19% strand | Q54D44 |
Pockets
20 pockets found on a 1 Å grid, 16 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 510 | 0.80 | 0.87 | 52 | empty |
| 2 | 742 | 0.79 | 0.83 | 77 | empty |
| 3 | 1114 | 0.78 | 0.80 | 122 | empty |
| 4 | 577 | 0.76 | 0.83 | 57 | empty |
| 5 | 656 | 0.73 | 0.79 | 39 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q54D44
- Elsewhere: UniProt Q54D44 · AlphaFold DB Q54D44
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