Research workbench
AlphaFold monomer V2.0 prediction for polyketide synthase 2 (A0A0B4H8J1)
Analyse AlphaFold monomer V2.0 prediction for polyketide synthase 2 (A0A0B4H8J1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A0A0B4H8J1
- Type
- protein
- Length
- 2,157 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa73BAb1DabE4333A884D03393eAa10c3B4215494
- Molecule
- Polyketide synthase 2
- Pockets
- 20 · best druggability 0.78
Structure
1 distinct chain · 38% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Polyketide synthase 2 | protein | 2157 | 38% helix, 18% strand | — |
Pockets
20 pockets found on a 1 Å grid, 11 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 100 | 0.78 | 0.98 | 20 | empty |
| 2 | 615 | 0.75 | 0.81 | 69 | empty |
| 3 | 97 | 0.75 | 0.95 | 22 | empty |
| 4 | 801 | 0.70 | 0.76 | 59 | empty |
| 5 | 552 | 0.69 | 0.78 | 58 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
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