Research workbench
AlphaFold monomer V2.0 prediction for plastidial pyruvate kinase 3, chloroplastic (Q93Z53)
Analyse AlphaFold monomer V2.0 prediction for plastidial pyruvate kinase 3… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q93Z53
- Type
- protein
- Length
- 571 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4d07E6a23DeB6B95bd9b90EcB67368b7e8D3B77e
- Molecule
- Plastidial pyruvate kinase 3, chloroplastic
- UniProt
- Q93Z53
- Pockets
- 7 · best druggability 0.69
Structure
1 distinct chain · 31% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Plastidial pyruvate kinase 3, chloroplastic | protein | 571 | 31% helix, 20% strand | Q93Z53 |
Pockets
7 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 457 | 0.69 | 0.80 | 58 | empty |
| 2 | 243 | 0.66 | 0.84 | 24 | empty |
| 3 | 287 | 0.58 | 0.78 | 43 | empty |
| 4 | 107 | 0.53 | 0.83 | 25 | empty |
| 5 | 79 | 0.36 | 0.76 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q93Z53
- Elsewhere: UniProt Q93Z53 · AlphaFold DB Q93Z53
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