Research workbench
AlphaFold monomer V2.0 prediction for SERINE/THREONINE-protein kinase pkng (P9WI73)
Analyse AlphaFold monomer V2.0 prediction for SERINE/THREONINE-protein kinase pkng… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P9WI73
- Type
- protein
- Length
- 750 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5BeA89782341f98147F2D811B063F91F0aE7D7bF
- Molecule
- SERINE/THREONINE-protein kinase pkng
- UniProt
- P9WI73
- Pockets
- 7 · best druggability 0.78
Structure
1 distinct chain · 41% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | SERINE/THREONINE-protein kinase pkng | protein | 750 | 41% helix, 11% strand | P9WI73 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 856 | 0.78 | 0.81 | 88 | empty |
| 2 | 143 | 0.59 | 0.84 | 32 | empty |
| 3 | 108 | 0.48 | 0.80 | 20 | empty |
| 4 | 58 | 0.42 | 0.82 | 17 | empty |
| 5 | 118 | 0.41 | 0.76 | 24 | empty |
Compared structures
- 4Y12 · Crystal structure of the S/T protein kinase pkng from mycobacterium tuberculosis in… · an experimental structure of the same protein · chain A against A, TM-score 0.41
- 4Y12 · Crystal structure of the S/T protein kinase PknG from Mycobacterium tuberculosis in… · an experimental structure of the same protein · chain A against A, TM-score 0.41
- 4Y0X · Crystal structure of the S/T protein kinase PknG from Mycobacterium tuberculosis in… · an experimental structure of the same protein · chain A against A, TM-score 0.41
- 4Y0X · Crystal structure of the S/T protein kinase pkng from mycobacterium tuberculosis in… · an experimental structure of the same protein · chain A against A, TM-score 0.41
- 7Q52 · Crystal structure of S/T protein kinase PknG from Mycobacterium tuberculosis in complex… · an experimental structure of the same protein · chain A against AAA, TM-score 0.41
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P9WI73
- Elsewhere: UniProt P9WI73 · AlphaFold DB P9WI73
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