Research workbench
AlphaFold monomer V2.0 prediction for polyphosphate kinase PPK2B (Q8NM65)
Analyse AlphaFold monomer V2.0 prediction for polyphosphate kinase PPK2B (Q8NM65) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8NM65
- Type
- protein
- Length
- 306 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7a1388B6Aad67B04634A32f63b8A6D6005eab86c
- Molecule
- Polyphosphate kinase PPK2B
- UniProt
- Q8NM65
- Pockets
- 3 · best druggability 0.66
Structure
1 distinct chain · 46% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Polyphosphate kinase PPK2B | protein | 306 | 46% helix, 13% strand | Q8NM65 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 495 | 0.66 | 0.78 | 47 | empty |
| 2 | 93 | 0.51 | 0.83 | 21 | empty |
| 3 | 52 | 0.27 | 0.74 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8NM65
- Elsewhere: UniProt Q8NM65 · AlphaFold DB Q8NM65
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