Research workbench
AlphaFold monomer V2.0 prediction for polycystic kidney disease protein 1-like 3 (Q7Z443)
Analyse AlphaFold monomer V2.0 prediction for polycystic kidney disease protein 1-like… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q7Z443
- Type
- protein
- Length
- 1,732 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9188600a0FCa2914254C94299b1bd9721Bc4D500
- Molecule
- Polycystic kidney disease protein 1-like 3
- UniProt
- Q7Z443
- Pockets
- 20 · best druggability 0.81
Structure
1 distinct chain · 40% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Polycystic kidney disease protein 1-like 3 | protein | 1732 | 40% helix, 14% strand | Q7Z443 |
Pockets
20 pockets found on a 1 Å grid, 12 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1121 | 0.81 | 0.82 | 96 | empty |
| 2 | 855 | 0.78 | 0.81 | 74 | empty |
| 3 | 732 | 0.76 | 0.81 | 87 | empty |
| 4 | 836 | 0.72 | 0.77 | 75 | empty |
| 5 | 367 | 0.72 | 0.83 | 46 | empty |
Modifications
Observed in the structure: 7 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7Z443
- Elsewhere: UniProt Q7Z443 · AlphaFold DB Q7Z443
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