Research workbench
AlphaFold monomer V2.0 prediction for pi protein (P03067)
Analyse AlphaFold monomer V2.0 prediction for pi protein (P03067) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P03067
- Type
- protein
- Length
- 305 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb3c0C983Fc44934AC589D7131C08a72544EBB92E
- Molecule
- Pi protein
- UniProt
- P03067
- Pockets
- 3 · best druggability 0.53
Structure
1 distinct chain · 41% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pi protein | protein | 305 | 41% helix, 23% strand | P03067 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 218 | 0.53 | 0.77 | 28 | empty |
| 2 | 154 | 0.41 | 0.74 | 23 | empty |
| 3 | 58 | 0.30 | 0.75 | 14 | empty |
Compared structures
- 2NRA · Crystal structure of Pi initiator protein in complex with iteron DNA · an experimental structure of the same protein · chain A against C, TM-score 0.79
- 2NRA · Crystal structure of pi initiator protein in complex with iteron DNA · an experimental structure of the same protein · chain A against C, TM-score 0.79
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03067
- Elsewhere: UniProt P03067 · AlphaFold DB P03067
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