Research workbench
AlphaFold monomer V2.0 prediction for alpha-glucan phosphorylase 2, cytosolic (Q9SD76)
Analyse AlphaFold monomer V2.0 prediction for alpha-glucan phosphorylase 2, cytosolic… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9SD76
- Type
- protein
- Length
- 841 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBF0D2e107Ce1EcD2C4369B042274201DB719AaAF
- Molecule
- Alpha-glucan phosphorylase 2, cytosolic
- UniProt
- Q9SD76
- Pockets
- 10 · best druggability 0.83
Structure
1 distinct chain · 52% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alpha-glucan phosphorylase 2, cytosolic | protein | 841 | 52% helix, 14% strand | Q9SD76 |
Pockets
10 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1139 | 0.83 | 0.84 | 106 | empty |
| 2 | 152 | 0.77 | 0.94 | 40 | empty |
| 3 | 113 | 0.46 | 0.78 | 17 | empty |
| 4 | 87 | 0.37 | 0.76 | 18 | empty |
| 5 | 74 | 0.36 | 0.76 | 16 | empty |
Compared structures
- 4BQF · Arabidopsis thaliana cytosolic alpha-1,4-glucan phosphorylase (PHS2) in complex with… · an experimental structure of the same protein · chain A against B, TM-score 0.98
- 4BQF · Arabidopsis thaliana cytosolic alpha-1,4-glucan phosphorylase (PHS2) in complex with… · an experimental structure of the same protein · chain A against B, TM-score 0.98
- 4BQI · ARABIDOPSIS THALIANA cytosolic alpha-1,4-glucan phosphorylase (PHS2) in complex with… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 4BQI · Arabidopsis thaliana cytosolic alpha-1,4-glucan phosphorylase (PHS2) in complex with… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 4BQE · Arabidopsis thaliana Cytosolic Alpha-1,4-glucan Phosphorylase (PHS2) · an experimental structure of the same protein · chain A against B, TM-score 0.98
- 4BQE · Arabidopsis thaliana cytosolic alpha-1,4-glucan phosphorylase (PHS2) · an experimental structure of the same protein · chain A against B, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9SD76
- Elsewhere: UniProt Q9SD76 · AlphaFold DB Q9SD76
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