Research workbench
AlphaFold monomer V2.0 prediction for deoxyribodipyrimidine photo- lyase (Q55081)
Analyse AlphaFold monomer V2.0 prediction for deoxyribodipyrimidine photo- lyase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q55081
- Type
- protein
- Length
- 488 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf4f3a26F6765d1790EF70B414daE91cC86a493C1
- Molecule
- Deoxyribodipyrimidine photo-lyase
- UniProt
- Q55081
- Pockets
- 5 · best druggability 0.82
Structure
1 distinct chain · 52% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Deoxyribodipyrimidine photo-lyase | protein | 488 | 52% helix, 7% strand | Q55081 |
Pockets
5 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 529 | 0.82 | 0.88 | 44 | empty |
| 2 | 322 | 0.74 | 0.86 | 36 | empty |
| 3 | 56 | 0.56 | 0.89 | 19 | empty |
| 4 | 209 | 0.55 | 0.79 | 32 | empty |
| 5 | 54 | 0.32 | 0.77 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q55081
- Elsewhere: UniProt Q55081 · AlphaFold DB Q55081
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