Research workbench
AlphaFold monomer V2.0 prediction for deoxyribodipyrimidine photo- lyase (P25078)
Analyse AlphaFold monomer V2.0 prediction for deoxyribodipyrimidine photo- lyase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P25078
- Type
- protein
- Length
- 473 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3E00F62D3140A99ec52E6a60794edd4CcC68D67b
- Molecule
- Deoxyribodipyrimidine photo-lyase
- UniProt
- P25078
- Pockets
- 4 · best druggability 0.83
Structure
1 distinct chain · 53% helix, 6% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Deoxyribodipyrimidine photo-lyase | protein | 473 | 53% helix, 6% strand | P25078 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 486 | 0.83 | 0.90 | 38 | empty |
| 2 | 193 | 0.73 | 0.89 | 37 | empty |
| 3 | 99 | 0.44 | 0.79 | 17 | empty |
| 4 | 66 | 0.32 | 0.76 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P25078
- Elsewhere: UniProt P25078 · AlphaFold DB P25078
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