Research workbench
AlphaFold monomer V2.0 prediction for blue-light photoreceptor (O34627)
Analyse AlphaFold monomer V2.0 prediction for blue-light photoreceptor (O34627) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O34627
- Type
- protein
- Length
- 261 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBF0D2e107Ce1EcD2C4369B042274201DB719AaAF
- Molecule
- Blue-light photoreceptor
- UniProt
- O34627
- Pockets
- 1 · best druggability 0.66
Structure
1 distinct chain · 44% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Blue-light photoreceptor | protein | 261 | 44% helix, 26% strand | O34627 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 157 | 0.66 | 0.86 | 25 | empty |
Compared structures
- 4GCZ · Structure of a blue-light photoreceptor · an experimental structure of the same protein · chain A against B, TM-score 0.58
- 4GCZ · Structure of a blue-light photoreceptor · an experimental structure of the same protein · chain A against B, TM-score 0.58
- 2MWG · Full-Length Solution Structure Of YtvA, a LOV-Photoreceptor Protein and Regulator of… · an experimental structure of the same protein · chain A against A, TM-score 0.56
- 2MWG · Full-length solution structure of ytva, a lov-photoreceptor protein and regulator of… · an experimental structure of the same protein · chain A against A, TM-score 0.56
- 2PR6 · Structural Basis for Light-dependent Signaling in the Dimeric LOV Photosensor YtvA (Light… · an experimental structure of the same protein · chain A against A, TM-score 0.47
- 2PR6 · Structural basis for light-dependent signaling in the dimeric lov photosensor ytva (light… · an experimental structure of the same protein · chain A against A, TM-score 0.47
- 2PR5 · Structural basis for light-dependent signaling in the dimeric lov photosensor ytva (dark… · an experimental structure of the same protein · chain A against A, TM-score 0.47
- 2PR5 · Structural Basis for Light-dependent Signaling in the Dimeric LOV Photosensor YtvA (Dark… · an experimental structure of the same protein · chain A against A, TM-score 0.47
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O34627
- Elsewhere: UniProt O34627 · AlphaFold DB O34627
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