Research workbench
AlphaFold monomer V2.0 prediction for virulence transcriptional regulatory protein phop (P0DM78)
Analyse AlphaFold monomer V2.0 prediction for virulence transcriptional regulatory… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0DM78
- Type
- protein
- Length
- 224 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBF0D2e107Ce1EcD2C4369B042274201DB719AaAF
- Molecule
- Virulence transcriptional regulatory protein phop
- UniProt
- P0DM78
- Pockets
- 4 · best druggability 0.46
Structure
1 distinct chain · 42% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Virulence transcriptional regulatory protein phop | protein | 224 | 42% helix, 22% strand | P0DM78 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 97 | 0.46 | 0.80 | 24 | empty |
| 2 | 153 | 0.44 | 0.75 | 20 | empty |
| 3 | 109 | 0.40 | 0.76 | 22 | empty |
| 4 | 55 | 0.29 | 0.75 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DM78
- Elsewhere: UniProt P0DM78 · AlphaFold DB P0DM78
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