Research workbench
AlphaFold monomer V2.0 prediction for periplasmic [nife] hydrogenase small subunit 1 (Q06173)
Analyse AlphaFold monomer V2.0 prediction for periplasmic [nife] hydrogenase small… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q06173
- Type
- protein
- Length
- 317 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5BeA89782341f98147F2D811B063F91F0aE7D7bF
- Molecule
- Periplasmic [nife] hydrogenase small subunit 1
- UniProt
- Q06173
- Pockets
- 5 · best druggability 0.69
Structure
1 distinct chain · 41% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Periplasmic [nife] hydrogenase small subunit 1 | protein | 317 | 41% helix, 14% strand | Q06173 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 53 | 0.69 | 0.96 | 20 | empty |
| 2 | 268 | 0.56 | 0.77 | 40 | empty |
| 3 | 127 | 0.50 | 0.79 | 31 | empty |
| 4 | 80 | 0.47 | 0.82 | 22 | empty |
| 5 | 68 | 0.31 | 0.75 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q06173
- Elsewhere: UniProt Q06173 · AlphaFold DB Q06173
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