Research workbench

AlphaFold monomer V2.0 prediction for probable ABC transporter PHOSPHONATE/PHOSPHITE binding protein PHND2 (A3PDP9)

Analyse AlphaFold monomer V2.0 prediction for probable ABC transporter… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: A3PDP9
Type: protein
Length: 292 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x0D671490EE06E75975e90D7F99F73B20BE618744
Molecule: Probable ABC transporter PHOSPHONATE/PHOSPHITE binding protein PHND2
UniProt: A3PDP9
Pockets: 1 · best druggability 0.69

Structure

1 distinct chain · 37% helix, 22% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Probable ABC transporter PHOSPHONATE/PHOSPHITE binding protein PHND2	protein	292	37% helix, 22% strand	A3PDP9

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	256	0.69	0.84	31	empty

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

5LV1 · 2.12 A resolution structure of PtxB from Prochlorococcus marinus (MIT 9301) in complex… · an experimental structure of the same protein · chain A against B, TM-score 0.90
5LV1 · 2.12 a resolution structure of ptxb from prochlorococcus marinus (mit 9301) in complex… · an experimental structure of the same protein · chain A against A, TM-score 0.90

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A3PDP9
Elsewhere: UniProt A3PDP9 · AlphaFold DB A3PDP9

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.