Research workbench
AlphaFold monomer V2.0 prediction for pH-interacting protein (Q8VDD9)
Analyse AlphaFold monomer V2.0 prediction for pH-interacting protein (Q8VDD9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8VDD9
- Type
- protein
- Length
- 1,821 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6DAA77C4263E74E745cA9c4D8E291e57e8991Cf5
- Molecule
- PH-interacting protein
- UniProt
- Q8VDD9
- Pockets
- 19 · best druggability 0.81
Structure
1 distinct chain · 21% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | PH-interacting protein | protein | 1821 | 21% helix, 17% strand | Q8VDD9 |
Pockets
19 pockets found on a 1 Å grid, 10 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1038 | 0.81 | 0.82 | 100 | empty |
| 2 | 1174 | 0.79 | 0.81 | 92 | empty |
| 3 | 437 | 0.75 | 0.84 | 49 | empty |
| 4 | 138 | 0.75 | 0.93 | 33 | empty |
| 5 | 248 | 0.65 | 0.83 | 27 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8VDD9
- Elsewhere: UniProt Q8VDD9 · AlphaFold DB Q8VDD9
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