Research workbench

AlphaFold monomer V2.0 prediction for phd finger protein 10 (Q8WUB8)

Analyse AlphaFold monomer V2.0 prediction for phd finger protein 10 (Q8WUB8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q8WUB8
Type: protein
Length: 498 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x2358fDf347F514B5e6fFcFa89F8c28fA3A0E58EF
Molecule: Phd finger protein 10
UniProt: Q8WUB8
Pockets: 5 · best druggability 0.41

Structure

1 distinct chain · 25% helix, 7% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Phd finger protein 10	protein	498	25% helix, 7% strand	Q8WUB8

Pockets

5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	67	0.41	0.81	18	empty
2	70	0.41	0.80	19	empty
3	94	0.38	0.75	21	empty
4	68	0.34	0.76	24	empty
5	65	0.31	0.74	14	empty

Compared structures

7VDV · The overall structure of human chromatin remodeling pbaf-nucleosome complex · an experimental structure of the same protein · chain A against R, TM-score 0.11
7VDV · The overall structure of human chromatin remodeling PBAF-nucleosome complex · an experimental structure of the same protein · chain A against R, TM-score 0.11
7Y8R · The nucleosome-bound human PBAF complex · an experimental structure of the same protein · chain A against R, TM-score 0.07

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8WUB8
Elsewhere: UniProt Q8WUB8 · AlphaFold DB Q8WUB8

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