Research workbench
AlphaFold monomer V2.0 prediction for B-phycoerythrin beta chain (P27198)
Analyse AlphaFold monomer V2.0 prediction for B-phycoerythrin beta chain (P27198) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P27198
- Type
- protein
- Length
- 177 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xA5c98ce6810a16B92Cbab4B878Cb05BeDef05E8E
- Molecule
- B-phycoerythrin beta chain
- UniProt
- P27198
- Pockets
- 2 · best druggability 0.59
Structure
1 distinct chain · 72% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | B-phycoerythrin beta chain | protein | 177 | 72% helix, 0% strand | P27198 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 107 | 0.59 | 0.86 | 25 | empty |
| 2 | 55 | 0.37 | 0.80 | 16 | empty |
Compared structures
- 1XG0 · High resolution crystal structure of phycoerythrin 545 from the marine cryptophyte… · an experimental structure of the same protein · chain A against C, TM-score 0.82
- 1XG0 · High resolution crystal structure of phycoerythrin 545 from the marine cryptophyte… · an experimental structure of the same protein · chain A against C, TM-score 0.82
- 1QGW · Crystal structure of phycoerythrin 545 from the marine cryptophyte rhodomonas CS24 · an experimental structure of the same protein · chain A against C, TM-score 0.82
- 1QGW · Crystal structure of phycoerythrin 545 from the marine cryptophyte rhodomonas CS24 · an experimental structure of the same protein · chain A against C, TM-score 0.82
- 1XF6 · High resolution crystal structure of phycoerythrin 545 from the marine cryptophyte… · an experimental structure of the same protein · chain A against C, TM-score 0.82
- 1XF6 · High resolution crystal structure of phycoerythrin 545 from the marine cryptophyte… · an experimental structure of the same protein · chain A against C, TM-score 0.82
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P27198
- Elsewhere: UniProt P27198 · AlphaFold DB P27198
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