Research workbench
AlphaFold monomer V2.0 prediction for phycoerythrin alpha-3 chain, chloroplastic (Q00433)
Analyse AlphaFold monomer V2.0 prediction for phycoerythrin alpha-3 chain… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q00433
- Type
- protein
- Length
- 128 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x366cE1f17013a0D1c76C8fF1195e460629Fd5dB4
- Molecule
- Phycoerythrin alpha-3 chain, chloroplastic
- UniProt
- Q00433
- Pockets
- 1 · best druggability 0.39
Structure
1 distinct chain · 31% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phycoerythrin alpha-3 chain, chloroplastic | protein | 128 | 31% helix, 14% strand | Q00433 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 55 | 0.39 | 0.81 | 16 | empty |
Compared structures
- 1XF6 · High resolution crystal structure of phycoerythrin 545 from the marine cryptophyte… · an experimental structure of the same protein · chain A against A, TM-score 0.59
- 1XF6 · High resolution crystal structure of phycoerythrin 545 from the marine cryptophyte… · an experimental structure of the same protein · chain A against A, TM-score 0.59
- 1QGW · Crystal structure of phycoerythrin 545 from the marine cryptophyte rhodomonas CS24 · an experimental structure of the same protein · chain A against A, TM-score 0.59
- 1QGW · Crystal structure of phycoerythrin 545 from the marine cryptophyte rhodomonas CS24 · an experimental structure of the same protein · chain A against A, TM-score 0.59
- 1XG0 · High resolution crystal structure of phycoerythrin 545 from the marine cryptophyte… · an experimental structure of the same protein · chain A against A, TM-score 0.59
- 1XG0 · High resolution crystal structure of phycoerythrin 545 from the marine cryptophyte… · an experimental structure of the same protein · chain A against A, TM-score 0.59
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q00433
- Elsewhere: UniProt Q00433 · AlphaFold DB Q00433
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