Research workbench
AlphaFold monomer V2.0 prediction for C-phycocyanin beta subunit (Q54714)
Analyse AlphaFold monomer V2.0 prediction for C-phycocyanin beta subunit (Q54714) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q54714
- Type
- protein
- Length
- 172 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x71112d4fF7ebb3b617963c05f052289e073082FD
- Molecule
- C-phycocyanin beta subunit
- UniProt
- Q54714
- Pockets
- 1 · best druggability 0.65
Structure
1 distinct chain · 76% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | C-phycocyanin beta subunit | protein | 172 | 76% helix, 0% strand | Q54714 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 122 | 0.65 | 0.88 | 22 | empty |
Compared structures
- 7SC8 · Synechocystis PCC 6803 Phycobilisome rod from PBS sample · an experimental structure of the same protein · chain A against BJ, TM-score 0.99
- 7SCA · Synechocystis PCC 6803 Phycobilisome rod from OCP-PBS complex sample · an experimental structure of the same protein · chain A against BJ, TM-score 0.99
- 8TRO · Rod from high-resolution phycobilisome quenched by OCP (local refinement) · an experimental structure of the same protein · chain A against 9, TM-score 0.99
- 4F0T · X-Ray Crystal Structure of Phycocyanin from Synechocystis sp. PCC 6803 · an experimental structure of the same protein · chain A against B, TM-score 0.99
- 4F0T · X-ray crystal structure of phycocyanin from synechocystis sp. pcc 6803 · an experimental structure of the same protein · chain A against B, TM-score 0.99
- 8TO5 · Central rod disk in C1 symmetry of high-resolution phycobilisome quenched by OCP (local… · an experimental structure of the same protein · chain A against N, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q54714
- Elsewhere: UniProt Q54714 · AlphaFold DB Q54714
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