Research workbench
AlphaFold monomer V2.0 prediction for C-phycocyanin alpha chain (P00306)
Analyse AlphaFold monomer V2.0 prediction for C-phycocyanin alpha chain (P00306) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P00306
- Type
- protein
- Length
- 162 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x2039B763eeE1b58621eD7f4526b6963909deACAd
- Molecule
- C-phycocyanin alpha chain
- UniProt
- P00306
- Pockets
- 1 · best druggability 0.60
Structure
1 distinct chain · 77% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | C-phycocyanin alpha chain | protein | 162 | 77% helix, 0% strand | P00306 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 163 | 0.60 | 0.82 | 27 | empty |
Compared structures
- 1PHN · Structure of phycocyanin from cyanidium caldarium at 1.65A resolution · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1PHN · Structure of phycocyanin from cyanidium caldarium at 1.65A resolution · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 3KVS · The high resolution structure of C-phycocyanin from galdieria sulphuraria · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 3KVS · The high resolution structure of C-Phycocyanin from Galdieria Sulphuraria · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 3BRP · Crystal Structure of C-Phycocyanin from Galdieria sulphuraria · an experimental structure of the same protein · chain A against A, TM-score 0.97
- 3BRP · Crystal structure of C-phycocyanin from galdieria sulphuraria · an experimental structure of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00306
- Elsewhere: UniProt P00306 · AlphaFold DB P00306
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