Research workbench
AlphaFold monomer V2.0 prediction for probable exopolygalacturonase B (Q873X6)
Analyse AlphaFold monomer V2.0 prediction for probable exopolygalacturonase B (Q873X6) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q873X6
- Type
- protein
- Length
- 440 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xfEbB23e5889f981c58b0c3A97247348dB3e08418
- Molecule
- Probable exopolygalacturonase B
- UniProt
- Q873X6
- Pockets
- 2 · best druggability 0.59
Structure
1 distinct chain · 9% helix, 48% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable exopolygalacturonase B | protein | 440 | 9% helix, 48% strand | Q873X6 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 270 | 0.59 | 0.79 | 40 | empty |
| 2 | 78 | 0.32 | 0.74 | 13 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q873X6
- Elsewhere: UniProt Q873X6 · AlphaFold DB Q873X6
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